STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_1457Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1457. (135 aa)    
Predicted Functional Partners:
hisD
Histidinol dehydrogenase (hisD); Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
       0.778
MJ_1458
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 58.60; identified by sequence similarity; putative.
       0.599
MJ_1455
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1455.
       0.552
ade
Adenine deaminase (adeC); Similar to GB:D37799 SP:P39761 GB:X83795 PID:633167 PID:1065989 percent identity: 35.99; identified by sequence similarity; putative; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
       0.401
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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