Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MJ_0206 | MJ_1463 | Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 50.38; identified by sequence similarity; putative. | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1463; Belongs to the UPF0128 family. | 0.431 |
MJ_1461 | MJ_1462 | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1461; To M.jannaschii MJ1356. | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1462. | 0.529 |
MJ_1461 | MJ_1463 | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1461; To M.jannaschii MJ1356. | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1463; Belongs to the UPF0128 family. | 0.495 |
MJ_1462 | MJ_1461 | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1462. | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1461; To M.jannaschii MJ1356. | 0.529 |
MJ_1462 | MJ_1463 | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1462. | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1463; Belongs to the UPF0128 family. | 0.726 |
MJ_1462 | MJ_1464 | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1462. | Hypothetical GTP-binding protein (SP:P40010); Similar to SP:P40010 PID:603598 percent identity: 34.59; identified by sequence similarity; putative; Belongs to the TRAFAC class YlqF/YawG GTPase family. | 0.487 |
MJ_1463 | MJ_0206 | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1463; Belongs to the UPF0128 family. | Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 50.38; identified by sequence similarity; putative. | 0.431 |
MJ_1463 | MJ_1461 | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1463; Belongs to the UPF0128 family. | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1461; To M.jannaschii MJ1356. | 0.495 |
MJ_1463 | MJ_1462 | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1463; Belongs to the UPF0128 family. | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1462. | 0.726 |
MJ_1463 | MJ_1464 | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1463; Belongs to the UPF0128 family. | Hypothetical GTP-binding protein (SP:P40010); Similar to SP:P40010 PID:603598 percent identity: 34.59; identified by sequence similarity; putative; Belongs to the TRAFAC class YlqF/YawG GTPase family. | 0.530 |
MJ_1464 | MJ_1462 | Hypothetical GTP-binding protein (SP:P40010); Similar to SP:P40010 PID:603598 percent identity: 34.59; identified by sequence similarity; putative; Belongs to the TRAFAC class YlqF/YawG GTPase family. | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1462. | 0.487 |
MJ_1464 | MJ_1463 | Hypothetical GTP-binding protein (SP:P40010); Similar to SP:P40010 PID:603598 percent identity: 34.59; identified by sequence similarity; putative; Belongs to the TRAFAC class YlqF/YawG GTPase family. | Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1463; Belongs to the UPF0128 family. | 0.530 |