STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_1467Hypothetical protein; Invalid gene; identified by GeneMark; putative; M. jannaschii predicted coding region MJ1467. (184 aa)    
Predicted Functional Partners:
artD
Hypothetical protein; Transpeptidase that recognizes and modifies its substrate by proteolytic cleavage of a sorting signal. Following cleavage, a covalent intermediate is formed via a thioester bond between the archaeosortase and its substrate, which is then transferred and covalently attached to the cell membrane.
       0.911
MJ_1470
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1470.
  
    0.898
MJ_1471
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1471.
       0.869
MJ_1472
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1472.
       0.861
MJ_1468
Surface antigen; Similar to PID:1213023 percent identity: 32.90; identified by sequence similarity; putative.
       0.755
MJ_0832.1
Hypothetical protein; Brute Force ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ0832.1.
  
  
 0.734
MJ_1469
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1469.
       0.734
MJ_0835.1
Hypothetical protein; Brute Force ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ0835.1.
  
  
 0.704
MJ_1466
Similar to GB:M23740 GB:M23741 PID:143113 percent identity: 33.76; identified by sequence similarity; putative; To M.jannaschii MJ0017 and MJ0139.1.
       0.558
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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