Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MJ_1470Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1470. (624 aa)    
Predicted Functional Partners:
MJ_1471
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1471.
     
 0.975
MJ_1468
Surface antigen; Similar to PID:1213023 percent identity: 32.90; identified by sequence similarity; putative.
       0.939
MJ_1472
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1472.
     
 0.938
MJ_1467
Hypothetical protein; Invalid gene; identified by GeneMark; putative; M. jannaschii predicted coding region MJ1467.
  
    0.930
artD
Hypothetical protein; Transpeptidase that recognizes and modifies its substrate by proteolytic cleavage of a sorting signal. Following cleavage, a covalent intermediate is formed via a thioester bond between the archaeosortase and its substrate, which is then transferred and covalently attached to the cell membrane.
       0.927
MJ_1469
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1469.
       0.853
MJ_1070
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1070.
  
  
 0.722
MJ_0833
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0833.
  
  
 0.563
MJ_0835
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0835.
     
 0.534
MJ_0836
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0836.
     
 0.523
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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