STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_1480Conserved hypothetical protein; Similar to GP:1653730 percent identity: 47.10; identified by sequence similarity; putative. (423 aa)    
Predicted Functional Partners:
MJ_1481
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 36.90; identified by sequence similarity; putative.
  
    0.961
pgk2
2-phosphoglycerate kinase (2pgk); Similar to GB:X70785 PID:467751 percent identity: 47.02; identified by sequence similarity; putative.
  
    0.943
MJ_1485
TRK system potassium uptake protein (trkG); Similar to SP:P23849 GB:X56783 PID:43140 GB:U00096 PID:1742227 percent identity: 28.23; identified by sequence similarity; putative.
       0.725
MJ_1483
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1483.
       0.716
MJ_1484
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1484.
       0.716
MJ_1479.1
Hypothetical protein; Brute Force ORF; identified by GeneMark; putative; M. jannaschii predicted coding region MJ1479.1.
       0.566
speB
Agmatinase (speB); Catalyzes the formation of putrescine from agmatine.
     
 0.514
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.