STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_1487Conserved hypothetical protein; Similar to GP:1653565 percent identity: 32.68; identified by sequence similarity; putative. (426 aa)    
Predicted Functional Partners:
MJ_1488
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1488.
  
  
 0.789
gltX
glutamyl-tRNA synthetase (gltX); Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).
 
   
 0.687
MJ_1407
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 48.00; identified by sequence similarity; putative; Belongs to the UPF0107 family.
       0.683
MJ_1313
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 55.44; identified by sequence similarity; putative; To M.thermoautotrophicum MTH1421.
       0.668
dnaG
Conserved hypothetical protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
       0.633
MJ_1133
Conserved hypothetical protein; Similar to SP:P22349 GB:X02586 PID:44543 percent identity: 45.85; identified by sequence similarity; putative; Belongs to the UbiD family.
       0.632
purT
Phosphoribosylglycinamide formyltransferase 2 (purT); Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.
       0.541
MJ_1489
Cell division control protein 47 (cdc47); Similar to SP:P38132 percent identity: 35.23; identified by sequence similarity; putative; Belongs to the MCM family.
       0.506
MJ_0150
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0150; Belongs to the M.jannaschii MJ0150/MJ0739/MJ0745/MJ1460/MJ1642 family.
  
  
 0.496
MJ_0716
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0716.
  
  
 0.496
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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