STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_1495Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 58.61; identified by sequence similarity; putative. (292 aa)    
Predicted Functional Partners:
MJ_1496
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 35.35; identified by sequence similarity; putative; Belongs to the UPF0127 family.
       0.955
MJ_1497
Acetylornithine deacetylase (argE); Similar to SP:P23908 GB:X55417 GB:X62807 PID:396304 PID:40955 percent identity: 26.01; identified by sequence similarity; putative.
       0.927
MJ_1494
AAA superfamily ATPase, similar to FtsH; The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex (By similarity).
       0.769
mjaVM
Modification methylase, type II R/M system; This methylase recognizes the double-stranded sequence GTAC, causes specific methylation on C-4 on both strands, and protects the DNA from cleavage by the MjaV endonuclease; Belongs to the N(4)/N(6)-methyltransferase family. N(4) subfamily.
  
    0.753
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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