STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_1553Transcriptional regulatory protein, arsR family; Similar to SP:P37309 GB:X80057 PID:466638 PID:510825 GB:U00096 percent identity: 32.31; identified by sequence similarity; putative. (157 aa)    
Predicted Functional Partners:
MJ_1552
Conserved hypothetical protein; Similar to PID:1197355 percent identity: 48.44; identified by sequence similarity; putative.
       0.705
MJ_1554
Conserved hypothetical protein; Similar to GB:AE000782 percent identity: 42.23; identified by sequence similarity; putative.
     
 0.564
MJ_1551
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 43.86; identified by sequence similarity; putative.
       0.479
MJ_1550
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1550.
       0.468
MJ_0319
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 67.02; identified by sequence similarity; putative.
       0.431
aspS
aspartyl-tRNA synthetase (aspS); Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn).
     
 0.413
taw2
Met-10+ related protein; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wyosine derivatives biosynthesis pathway. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S- adenosyl-L-methionine to 4-demethylwyosine (imG-14), forming 7- aminocarboxypropyl-demethylwyosine (wybutosine-86) at position 37 of tRNA(Phe).
 
     0.407
MJ_1396
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1396.
 
  
 0.400
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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