STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_1577Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1577. (598 aa)    
Predicted Functional Partners:
lemA
LemA protein; Similar to GP:1519287 percent identity: 36.96; identified by sequence similarity; putative.
 
     0.819
cbiF
Cobalamin biosynthesis precorrin-3 methylase (cbiF); Catalyzes the methylation of C-11 in cobalt-precorrin-4 to form cobalt-precorrin-5A.
       0.625
guaAA
GMP synthase (guaA); Catalyzes the synthesis of GMP from XMP.
       0.520
MJ_0260
Signal sequence peptidase I, SEC11; Similar to GB:Z47047 SP:P15367 PID:4433 PID:557828 PID:763367 percent identity: 36.52; identified by sequence similarity; putative.
  
    0.495
MJ_1009
Phosphate transport system regulatory protein (phoU); Plays a role in the regulation of phosphate uptake.
  
    0.474
MJ_1011
Peripheral membrane protein U (phoU); Similar to GB:L10328 SP:P07656 GB:K01992 GB:X02723 PID:145415 percent identity: 21.50; identified by sequence similarity; putative.
  
    0.474
MJ_1641
Repressor protein; Similar to GB:L10328 SP:P07656 GB:K01992 GB:X02723 PID:145415 percent identity: 25.00; identified by sequence similarity; putative.
  
    0.474
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.