Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
MJ_1590Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1590. (105 aa)    
Predicted Functional Partners:
MJ_0011
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0011.
  
    0.735
MJ_0818
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0818.
     
 0.489
MJ_1589
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1589.
       0.419
MJ_1337
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1337.
  
    0.413
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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