STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_1608Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1608. (70 aa)    
Predicted Functional Partners:
MJ_1607
LPS biosynthesis protein, putative; Similar to PID:1145194 percent identity: 33.33; identified by sequence similarity; putative; Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily.
       0.899
MJ_1610
Glucoamylase (cga); Similar to SP:P29761 PID:216417 percent identity: 26.58; identified by sequence similarity; putative; Belongs to the glycosyl hydrolase 15 family.
       0.863
MJ_1611
Alpha-amylase (amyA); Similar to GB:L22346 SP:P49067 PID:347940 percent identity: 27.10; identified by sequence similarity; putative.
       0.789
apgM1
Phosphonopyruvate decarboxylase (bcpC); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.703
MJ_1609
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1609; Belongs to the archaeal ATPase family.
       0.645
glgA
Glycogen synthase (glgA); Synthesizes alpha-1,4-glucan chains using ADP-glucose.
       0.468
pgi
Glucose-6-phosphate isomerase; Catalyzes the isomerization of glucose-6-P to fructose-6-P.
       0.411
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.