Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MJ_1631Glycogen phosphorylase (glgP); Similar to GB:Z25795 SP:P39123 PID:397492 PID:2293140 GB:AL009126 percent identity: 27.95; identified by sequence similarity; putative; Belongs to the glycogen phosphorylase family. (519 aa)    
Predicted Functional Partners:
glgA
Glycogen synthase (glgA); Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
  
 0.974
MJ_1611
Alpha-amylase (amyA); Similar to GB:L22346 SP:P49067 PID:347940 percent identity: 27.10; identified by sequence similarity; putative.
 
 
 0.955
argF
Ornithine carbamoyltransferase (argF); Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
  
  
 0.925
MJ_1334
UDP-glucose pyrophosphorylase (gtaB); Similar to GB:U02258 GB:L43967 SP:P47691 PID:406922 PID:1046172 percent identity: 46.21; identified by sequence similarity; putative.
    
 0.919
pgi
Glucose-6-phosphate isomerase; Catalyzes the isomerization of glucose-6-P to fructose-6-P.
  
  
 0.833
MJ_1632
Coenzyme PQQ synthesis protein (pqqE); Similar to SP:P27507 PID:809708 percent identity: 27.45; identified by sequence similarity; putative.
       0.773
MJ_1607
LPS biosynthesis protein, putative; Similar to PID:1145194 percent identity: 33.33; identified by sequence similarity; putative; Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily.
 
 
 0.762
gap
Glyceraldehyde 3-phosphate dehydrogenase; Similar to SP:P10618 PID:149792 percent identity: 60.00; identified by sequence similarity; putative.
  
 
 0.755
manB
Phosphomannomutase (pmmA); Catalyzes the formation of mannose-1-P from mannose-6-P. Can also use glucose-1-P.
 
  
 0.747
MJ_0198
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0198.
  
 
 0.725
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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