STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_1637Conserved hypothetical protein; Similar to GB:L42023 SP:P44099 PID:1006276 PID:1221154 PID:1205288 percent identity: 25.56; identified by sequence similarity; putative. (473 aa)    
Predicted Functional Partners:
mch
N5,N10-methenyl-tetrahydromethanopterin cyclohydrolase (mch); Catalyzes the reversible interconversion of 5-formyl-H(4)MPT to methenyl-H(4)MPT(+); Belongs to the MCH family.
       0.601
MJ_1635
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1635; In the N-terminal section; belongs to the transposase 2 family.
 
     0.524
MJ_0424
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ0424.
 
     0.471
rfcS
Activator 1 (replication factor C), 35 KD subunit; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcS subfamily.
 
   
 0.425
MJ_0423
Conserved hypothetical protein; Similar to GP:1652904 percent identity: 36.54; identified by sequence similarity; putative.
 
     0.407
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.