STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MJ_1678Acetyltransferase; Converts O-phospho-L-seryl-tRNA(Cys) (Sep-tRNA(Cys)) to L- cysteinyl-tRNA(Cys) (Cys-tRNA(Cys)). (396 aa)    
Predicted Functional Partners:
sepS
phenylalanyl-tRNA synthase alpha subunit; Catalyzes the attachment of O-phosphoserine (Sep) to tRNA(Cys).
  
 0.998
MJ_1481
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 36.90; identified by sequence similarity; putative.
    
 
 0.926
MJ_1477
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1477.
     
  0.900
spcS
Conserved hypothetical protein; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
  
   
 0.892
trkA
TRK system potassium uptake protein (trkA); Part of a potassium transport system.
   
    0.820
MJ_1676
Conserved hypothetical protein; Similar to GB:AE000666 percent identity: 42.92; identified by sequence similarity; putative; To M.thermoautotrophicum MTH564.
  
    0.787
MJ_0158
Selenocystein synthase (selA); Similar to SP:P23328 GB:M64177 PID:147804 PID:466729 GB:U00096 percent identity: 34.65; identified by sequence similarity; putative; Belongs to the UPF0425 family.
   
  
 0.785
pstK
Yeast KTI12 Protein; Specifically phosphorylates seryl-tRNA(Sec) to O- phosphoseryl-tRNA(Sec), an activated intermediate for selenocysteine biosynthesis.
  
   
 0.782
MJ_1677
Conserved hypothetical protein; Similar to GP:1787494 percent identity: 36.59; identified by sequence similarity; putative.
       0.779
MJ_1679
Hypothetical protein; Identified by GeneMark; putative; M. jannaschii predicted coding region MJ1679.
       0.746
Your Current Organism:
Methanocaldococcus jannaschii
NCBI taxonomy Id: 243232
Other names: M. jannaschii DSM 2661, Methanocaldococcus jannaschii DSM 2661, Methanocaldococcus jannaschii str. DSM 2661, Methanococcus jannaschii DSM 2661
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