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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA0072Conserved hypothetical protein; Identified by similarity to SP:O67039; match to protein family HMM PF01875; Belongs to the MEMO1 family. (267 aa)    
Predicted Functional Partners:
MCA0071
Conserved hypothetical protein TIGR00296; Identified by match to protein family HMM PF01871; match to protein family HMM TIGR00296.
    0.997
MCA0073
Putative pyruvate formate lyase-activating enzyme; Identified by similarity to OMNI:MT3225; match to protein family HMM PF04055.
     0.983
MCA2643
Conserved hypothetical protein; Identified by similarity to GP:17427847.
    
  0.694
gst
Glutathione S-transferase; Identified by similarity to SP:P39100; match to protein family HMM PF00043; match to protein family HMM PF02798; Belongs to the GST superfamily.
  
    0.460
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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