Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MCA0083Methyltransferase, UbiE/COQ5 family; Identified by similarity to OMNI:NTL01SS01907. (305 aa)    
Predicted Functional Partners:
MCA1641
Conserved hypothetical protein; Identified by similarity to GP:17431966.
  
     0.651
MCA2872
Identified by match to protein family HMM PF01360.
  
     0.618
MCA0084
Hypothetical protein; Identified by Glimmer2; putative.
       0.570
MCA1689
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.568
MCA0943
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.511
rimO
MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
       0.508
MCA2510
Putative lipoprotein.
  
     0.504
MCA1870
ribD C-terminal domain protein.
  
     0.493
MCA0085
Hypothetical protein; Identified by Glimmer2; putative.
       0.482
MCA0998
Putative methyltransferase; Identified by similarity to SP:P76145.
 
   
 0.456
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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