| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MCA0141 | MCA3015 | MCA0141 | MCA3015 | Conserved hypothetical protein; Identified by similarity to GP:17430491; match to protein family HMM PF01161; match to protein family HMM TIGR00481. | Putative oxidoreductase; Identified by similarity to SP:Q44091. | 0.900 |
| MCA0141 | rplB | MCA0141 | MCA2369 | Conserved hypothetical protein; Identified by similarity to GP:17430491; match to protein family HMM PF01161; match to protein family HMM TIGR00481. | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.826 |
| MCA0141 | rplM | MCA0141 | MCA0904 | Conserved hypothetical protein; Identified by similarity to GP:17430491; match to protein family HMM PF01161; match to protein family HMM TIGR00481. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.818 |
| MCA0141 | rplS | MCA0141 | MCA0395 | Conserved hypothetical protein; Identified by similarity to GP:17430491; match to protein family HMM PF01161; match to protein family HMM TIGR00481. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.829 |
| MCA0141 | rpmA | MCA0141 | MCA2247 | Conserved hypothetical protein; Identified by similarity to GP:17430491; match to protein family HMM PF01161; match to protein family HMM TIGR00481. | Ribosomal protein L27; Identified by similarity to SP:P02427; match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family. | 0.818 |
| MCA0141 | rpmJ | MCA0141 | MCA2351 | Conserved hypothetical protein; Identified by similarity to GP:17430491; match to protein family HMM PF01161; match to protein family HMM TIGR00481. | Ribosomal protein L36; Identified by similarity to SP:P21194; match to protein family HMM PF00444; match to protein family HMM TIGR01022; Belongs to the bacterial ribosomal protein bL36 family. | 0.817 |
| MCA0141 | rpsB | MCA0141 | MCA0567 | Conserved hypothetical protein; Identified by similarity to GP:17430491; match to protein family HMM PF01161; match to protein family HMM TIGR00481. | Ribosomal protein S2; Identified by similarity to SP:P02351; match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family. | 0.825 |
| MCA0141 | rpsE | MCA0141 | MCA2355 | Conserved hypothetical protein; Identified by similarity to GP:17430491; match to protein family HMM PF01161; match to protein family HMM TIGR00481. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.817 |
| MCA0141 | rpsJ | MCA0141 | MCA2373 | Conserved hypothetical protein; Identified by similarity to GP:17430491; match to protein family HMM PF01161; match to protein family HMM TIGR00481. | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.830 |
| MCA0141 | rpsO | MCA0141 | MCA1310 | Conserved hypothetical protein; Identified by similarity to GP:17430491; match to protein family HMM PF01161; match to protein family HMM TIGR00481. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.817 |
| MCA3015 | MCA0141 | MCA3015 | MCA0141 | Putative oxidoreductase; Identified by similarity to SP:Q44091. | Conserved hypothetical protein; Identified by similarity to GP:17430491; match to protein family HMM PF01161; match to protein family HMM TIGR00481. | 0.900 |
| rplB | MCA0141 | MCA2369 | MCA0141 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Conserved hypothetical protein; Identified by similarity to GP:17430491; match to protein family HMM PF01161; match to protein family HMM TIGR00481. | 0.826 |
| rplB | rplM | MCA2369 | MCA0904 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.990 |
| rplB | rplS | MCA2369 | MCA0395 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.973 |
| rplB | rpmA | MCA2369 | MCA2247 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Ribosomal protein L27; Identified by similarity to SP:P02427; match to protein family HMM PF01016; match to protein family HMM TIGR00062; Belongs to the bacterial ribosomal protein bL27 family. | 0.973 |
| rplB | rpmJ | MCA2369 | MCA2351 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Ribosomal protein L36; Identified by similarity to SP:P21194; match to protein family HMM PF00444; match to protein family HMM TIGR01022; Belongs to the bacterial ribosomal protein bL36 family. | 0.980 |
| rplB | rpsB | MCA2369 | MCA0567 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Ribosomal protein S2; Identified by similarity to SP:P02351; match to protein family HMM PF00318; match to protein family HMM TIGR01011; Belongs to the universal ribosomal protein uS2 family. | 0.973 |
| rplB | rpsE | MCA2369 | MCA2355 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family. | 0.992 |
| rplB | rpsJ | MCA2369 | MCA2373 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.995 |
| rplB | rpsO | MCA2369 | MCA1310 | Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.973 |
STRING v12.5 is now available!
