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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA0154Glycosyl transferase, group 1 family protein; Identified by similarity to OMNI:VC0925; match to protein family HMM PF00534. (360 aa)    
Predicted Functional Partners:
MCA0147
Putative polysaccharide biosythesis protein; Identified by similarity to GP:4972659; match to protein family HMM PF02397.
 
  
 0.775
MCA0152
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
    
0.763
MCA0153
Putative membrane protein.
  
    0.745
MCA0151
Putative membrane protein.
       0.686
MCA0150
Conserved domain protein.
 
    0.664
MCA2124
Putative colanic acid biosynthesis glycosyl transferase; Identified by similarity to SP:P71243; match to protein family HMM PF00534.
  
     0.663
MCA0148
Putative capsular polysaccharide export protein; Identified by similarity to SP:Q46629; match to protein family HMM PF02563.
 
    0.622
MCA0149
Chain length determinant protein; Identified by match to protein family HMM PF02706.
 
    0.612
MCA2107
Putative nonribosomal peptide synthetase; Identified by similarity to GP:9715733; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM TIGR01733; match to protein family HMM TIGR02353; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.581
MCA1435
Glycosyl transferase, group 2 family; Identified by match to protein family HMM PF00535.
 
    0.567
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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