Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCA0208 | MCA0210 | MCA0208 | MCA0210 | Leucine rich repeat domain protein; Identified by match to protein family HMM PF01816. | Putative nifZ protein. | 0.933 |
MCA0208 | MCA0214 | MCA0208 | MCA0214 | Leucine rich repeat domain protein; Identified by match to protein family HMM PF01816. | Conserved hypothetical protein; Identified by similarity to GP:551688. | 0.873 |
MCA0208 | MCA0223 | MCA0208 | MCA0223 | Leucine rich repeat domain protein; Identified by match to protein family HMM PF01816. | Identified by similarity to GP:862325; match to protein family HMM PF03960; match to protein family HMM TIGR01616; Belongs to the ArsC family. | 0.569 |
MCA0208 | MCA0257 | MCA0208 | MCA0257 | Leucine rich repeat domain protein; Identified by match to protein family HMM PF01816. | Conserved hypothetical protein; Identified by similarity to GP:17131609. | 0.769 |
MCA0208 | MCA0258 | MCA0208 | MCA0258 | Leucine rich repeat domain protein; Identified by match to protein family HMM PF01816. | Ferredoxin, 2Fe-2S; Identified by similarity to SP:P25528; match to protein family HMM PF00111. | 0.538 |
MCA0208 | MCA0262 | MCA0208 | MCA0262 | Leucine rich repeat domain protein; Identified by match to protein family HMM PF01816. | ATPase, AAA family; Identified by match to protein family HMM PF00004. | 0.642 |
MCA0208 | nifW | MCA0208 | MCA0255 | Leucine rich repeat domain protein; Identified by match to protein family HMM PF01816. | Nitrogen fixation protein NifW; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family. | 0.772 |
MCA0210 | MCA0208 | MCA0210 | MCA0208 | Putative nifZ protein. | Leucine rich repeat domain protein; Identified by match to protein family HMM PF01816. | 0.933 |
MCA0210 | MCA0214 | MCA0210 | MCA0214 | Putative nifZ protein. | Conserved hypothetical protein; Identified by similarity to GP:551688. | 0.875 |
MCA0210 | MCA0257 | MCA0210 | MCA0257 | Putative nifZ protein. | Conserved hypothetical protein; Identified by similarity to GP:17131609. | 0.758 |
MCA0210 | MCA0258 | MCA0210 | MCA0258 | Putative nifZ protein. | Ferredoxin, 2Fe-2S; Identified by similarity to SP:P25528; match to protein family HMM PF00111. | 0.728 |
MCA0210 | MCA2116 | MCA0210 | MCA2116 | Putative nifZ protein. | Leucine rich repeat domain protein; Identified by match to protein family HMM PF01816. | 0.566 |
MCA0210 | nifW | MCA0210 | MCA0255 | Putative nifZ protein. | Nitrogen fixation protein NifW; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family. | 0.692 |
MCA0214 | MCA0208 | MCA0214 | MCA0208 | Conserved hypothetical protein; Identified by similarity to GP:551688. | Leucine rich repeat domain protein; Identified by match to protein family HMM PF01816. | 0.873 |
MCA0214 | MCA0210 | MCA0214 | MCA0210 | Conserved hypothetical protein; Identified by similarity to GP:551688. | Putative nifZ protein. | 0.875 |
MCA0214 | MCA0223 | MCA0214 | MCA0223 | Conserved hypothetical protein; Identified by similarity to GP:551688. | Identified by similarity to GP:862325; match to protein family HMM PF03960; match to protein family HMM TIGR01616; Belongs to the ArsC family. | 0.553 |
MCA0214 | MCA0257 | MCA0214 | MCA0257 | Conserved hypothetical protein; Identified by similarity to GP:551688. | Conserved hypothetical protein; Identified by similarity to GP:17131609. | 0.771 |
MCA0214 | MCA0258 | MCA0214 | MCA0258 | Conserved hypothetical protein; Identified by similarity to GP:551688. | Ferredoxin, 2Fe-2S; Identified by similarity to SP:P25528; match to protein family HMM PF00111. | 0.428 |
MCA0214 | MCA0262 | MCA0214 | MCA0262 | Conserved hypothetical protein; Identified by similarity to GP:551688. | ATPase, AAA family; Identified by match to protein family HMM PF00004. | 0.757 |
MCA0214 | MCA2116 | MCA0214 | MCA2116 | Conserved hypothetical protein; Identified by similarity to GP:551688. | Leucine rich repeat domain protein; Identified by match to protein family HMM PF01816. | 0.780 |
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