STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA0269Conserved domain protein; Identified by similarity to OMNI:NTL02SA0423. (149 aa)    
Predicted Functional Partners:
MCA0272
Type I restriction-modification system, S subunit domain protein.
 
 
 0.941
MCA0274
Putative type I restriction-modification system, R subunit; Identified by similarity to OMNI:NTL01XF02722; match to protein family HMM PF00270; match to protein family HMM PF04313; match to protein family HMM PF04851.
 
 
 0.829
MCA0270
Nucleotidyltransferase domain protein; Identified by similarity to SP:P43933; match to protein family HMM PF01909.
       0.773
MCA0271
Conserved domain protein; Identified by match to protein family HMM TIGR01987.
       0.773
MCA0838
Type I restriction-modification system, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.726
MCA1890
Type I restriction-modification system, S subunit; Identified by match to protein family HMM PF01420.
 
 
 0.711
MCA0277
Conserved hypothetical protein; Identified by similarity to GP:9187842.
  
 
 0.709
MCA1893
Type I restriction-modification system, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
 
 0.652
MCA0273
Conserved domain protein.
  
   0.630
MCA0836
Type I restriction-modification system, S subunit, EcoA family; Identified by match to protein family HMM PF01420.
 
 
 0.617
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.