Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MCA0318Putative SCO1/SenC family protein/methylamine utilization protein MauG; Identified by similarity to SP:Q49128; match to protein family HMM PF03150. (626 aa)    
Predicted Functional Partners:
MCA0317
Selenium-binding family protein; Identified by similarity to SP:Q63836.
 
   0.949
MCA0879
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.897
MCA0524
Cytochrome P460; Identified by similarity to GP:3659895.
 
  
 0.762
MCA2405
Cytochrome c family protein; Identified by similarity to SP:P95339; match to protein family HMM PF00034.
 
  
 0.737
MCA2397
Cytochrome c oxidase, subunit II; Identified by similarity to SP:P98052.
 
 0.701
petC
Ubiquinol--cytochrome c reductase, cytochrome c1; Identified by similarity to SP:P08501; match to protein family HMM PF02167.
     
 0.699
MCA2181
Identified by match to protein family HMM PF00034.
 
   
 0.673
MCA1775
Cytochrome c family protein.
  
  
 0.671
MCA2618
Cytochrome c-555; Identified by similarity to SP:P04369; match to protein family HMM PF00034.
  
  
 0.671
MCA0882
Putative cytochrome c oxidase assembly protein; Identified by similarity to SP:P56940; match to protein family HMM PF04442.
  
 0.641
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
Server load: low (22%) [HD]