STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA0404Type I restriction-modification system, M subunit domain protein. (51 aa)    
Predicted Functional Partners:
MCA0838
Type I restriction-modification system, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
 
 0.664
MCA0274
Putative type I restriction-modification system, R subunit; Identified by similarity to OMNI:NTL01XF02722; match to protein family HMM PF00270; match to protein family HMM PF04313; match to protein family HMM PF04851.
  
 
 0.652
MCA1893
Type I restriction-modification system, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
 
 0.652
MCA0272
Type I restriction-modification system, S subunit domain protein.
  
 
 0.587
MCA0277
Conserved hypothetical protein; Identified by similarity to GP:9187842.
  
 
 0.587
MCA1890
Type I restriction-modification system, S subunit; Identified by match to protein family HMM PF01420.
  
 
 0.587
MCA0836
Type I restriction-modification system, S subunit, EcoA family; Identified by match to protein family HMM PF01420.
  
 
 0.566
MCA1886
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SPL0989.
  
 
 0.566
MCA0405
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SMA00006.
   
   0.458
MCA1889
Conserved hypothetical protein; Identified by similarity to GP:6723238.
  
    0.409
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.