STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA0491Conserved hypothetical protein; Identified by similarity to GP:4378852. (388 aa)    
Predicted Functional Partners:
MCA0512
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01AA00598; Belongs to the UPF0753 family.
  
     0.722
MCA0492
Conserved domain protein; Identified by similarity to SP:Q47142.
       0.718
MCA0340
Putative membrane protein; Identified by similarity to GP:17133197.
  
     0.712
MCA1084
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.703
MCA2129
Identified by similarity to GP:4580028; match to protein family HMM PF07731; match to protein family HMM PF07732.
  
     0.702
MCA0810
Putative membrane protein; Identified by similarity to GP:3164083.
  
     0.689
MCA0342
Identified by match to protein family HMM PF00488.
  
     0.660
MCA0811
Identified by match to protein family HMM PF01048.
  
    0.648
MCA2758
Putative membrane protein.
  
     0.617
MCA0956
Hydroxylamine oxydoreductase; Identified by similarity to SP:Q50925.
  
     0.596
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.