Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MCA0519MutT/nudix family protein; Identified by similarity to GP:1001228; match to protein family HMM PF00293; Belongs to the Nudix hydrolase family. (146 aa)    
Predicted Functional Partners:
argH
Argininosuccinate lyase; Identified by similarity to SP:P50987; match to protein family HMM PF00206; match to protein family HMM TIGR00838.
 
      0.899
panE
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
      0.898
MCA2609
Identified by match to protein family HMM PF00459; Belongs to the inositol monophosphatase superfamily.
 
    0.877
MCA0520
Hypothetical protein; Identified by Glimmer2; putative.
       0.553
MCA0521
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01ST1808; match to protein family HMM PF05779; Belongs to the UPF0260 family.
       0.553
MCA0522
Hypothetical protein; Identified by Glimmer2; putative.
       0.495
MCA0523
Putative peptidyl-prolyl cis-trans isomerase, FKBP-type; Identified by similarity to SP:P45523; match to protein family HMM PF00254.
       0.446
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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