STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA0527Putative membrane protein; Identified by match to protein family HMM PF02517. (323 aa)    
Predicted Functional Partners:
MCA0526
Conserved domain protein; Identified by similarity to OMNI:NTL02SC1751; match to protein family HMM PF00596.
       0.773
MCA1366
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.748
MCA0744
Conserved hypothetical protein; Identified by similarity to OMNI:NTL03PA04460; match to protein family HMM PF06835.
  
     0.747
MCA0525
Hypothetical protein; Identified by Glimmer2; putative.
       0.741
MCA1689
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.693
MCA2739
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.663
MCA0310
Conserved domain protein; Identified by similarity to OMNI:NTL01AT1832.
  
     0.647
MCA1772
Polysaccharide biosynthesis protein; Identified by similarity to GP:19918600; match to protein family HMM PF01943.
  
    0.639
MCA0524
Cytochrome P460; Identified by similarity to GP:3659895.
       0.606
MCA1825
Conserved hypothetical protein; Identified by similarity to GP:17131822.
  
     0.586
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.