Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
MCA0614Hypothetical protein; Identified by Glimmer2; putative. (65 aa)    
Predicted Functional Partners:
galE-1
UDP-glucose 4-epimerase; Identified by similarity to SP:Q56623; match to protein family HMM PF07993.
       0.561
MCA0613
Identified by similarity to GP:6690125; match to protein family HMM PF00534.
       0.561
MCA0615
Putative alginate O-acetyltransferase; Identified by similarity to GP:1245347; match to protein family HMM PF03062; Belongs to the membrane-bound acyltransferase family.
       0.515
MCA0611
Putative mercuric ion binding protein; Identified by similarity to GP:2935549; match to protein family HMM PF00403; match to protein family HMM TIGR00003.
       0.450
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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