STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA0665Putative glycine cleavage system transcriptional repressor; Identified by similarity to SP:P23483. (175 aa)    
Predicted Functional Partners:
MCA0664
Antioxidant, AhpC/Tsa family; Identified by similarity to GP:17428331; match to protein family HMM PF00578.
  
    0.800
MCA2439
Putative cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.732
MCA0663
PhoH family protein; Identified by similarity to OMNI:NTL03PA03919; match to protein family HMM PF02562.
       0.667
MCA0323
Conserved domain protein; Identified by similarity to GP:17429805.
  
     0.620
MCA2528
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01XF01262.
  
    0.593
uppP
Putative undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.586
MCA0667
DedA family protein; Identified by similarity to SP:P09548; match to protein family HMM PF00597.
       0.547
MCA2138
Conserved hypothetical protein; Identified by similarity to SP:Q46868; match to protein family HMM PF04380.
  
     0.532
MCA1966
STAS domain protein; Identified by match to protein family HMM PF01740.
  
     0.531
MCA1366
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.513
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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