STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA0775Alcohol dehydrogenase, zinc-containing; Identified by similarity to OMNI:MT1911; match to protein family HMM PF00107. (342 aa)    
Predicted Functional Partners:
MCA1575
Alcohol dehydrogenase, zinc-containing; Identified by similarity to GP:17739984; match to protein family HMM PF00107.
  
  
 
0.925
MCA1639
Fatty acid desaturase domain protein; Identified by match to protein family HMM PF00487.
     
 0.910
mxaF
Methanol dehydrogenase protein, large subunit; Identified by similarity to SP:P16027; match to protein family HMM PF01011.
   
 
 0.902
mxaI
Methanol dehydrogenase, small subunit; Catalyzes the oxidation of primary alcohols including methanol.
     
  0.900
pepN
Identified by similarity to SP:P04825; match to protein family HMM PF01433; match to protein family HMM TIGR02414.
   
   0.696
MCA0996
Decarboxylase, thiamine pyrophosphate enzyme family; Identified by similarity to SP:P23234; match to protein family HMM PF00205; match to protein family HMM PF02776.
 
 
  
 0.469
MCA2379
Conserved hypothetical protein; Identified by similarity to GP:9950959.
 
     0.412
MCA1006
Acyltransferase family protein; Identified by similarity to OMNI:NTL01AA00691; match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01553.
   
 
 0.408
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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