Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MCA0778Putative methanol utilization control sensor protein moxY; Identified by similarity to SP:P29905; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF07730. (439 aa)    
Predicted Functional Partners:
MCA0777
DNA binding response regulator, LuxR family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00196.
 
 0.979
MCA0776
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
MCA1204
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF01590; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM TIGR00229.
 
 
 0.703
mxaF
Methanol dehydrogenase protein, large subunit; Identified by similarity to SP:P16027; match to protein family HMM PF01011.
 
    0.614
MCA2379
Conserved hypothetical protein; Identified by similarity to GP:9950959.
   
    0.599
MCA0781
Cytochrome c family protein; Identified by similarity to SP:P14774; match to protein family HMM PF00034.
 
     0.590
MCA0788
MxaL protein; Identified by similarity to GP:773183.
 
     0.577
MCA0785
MxaA protein; Identified by similarity to GP:773180.
 
     0.569
mxaI
Methanol dehydrogenase, small subunit; Catalyzes the oxidation of primary alcohols including methanol.
 
     0.561
MCA0787
MxaK protein; Identified by similarity to GP:2828246.
 
     0.550
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
Server load: low (24%) [HD]