Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mxaFMethanol dehydrogenase protein, large subunit; Identified by similarity to SP:P16027; match to protein family HMM PF01011. (601 aa)    
Predicted Functional Partners:
mxaI
Methanol dehydrogenase, small subunit; Catalyzes the oxidation of primary alcohols including methanol.
 
 
 0.999
MCA0780
MxaJ protein; Identified by similarity to GP:7258335.
 
  
 0.950
MCA0775
Alcohol dehydrogenase, zinc-containing; Identified by similarity to OMNI:MT1911; match to protein family HMM PF00107.
   
 
 0.904
MCA1575
Alcohol dehydrogenase, zinc-containing; Identified by similarity to GP:17739984; match to protein family HMM PF00107.
   
 
 0.904
MCA2866
Formaldehyde-activating enzyme; Identified by similarity to GP:11193064.
  
  
 0.883
MCA0781
Cytochrome c family protein; Identified by similarity to SP:P14774; match to protein family HMM PF00034.
 
 
 0.878
mmoX
Methane monooxygenase, A subunit, alpha chain; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds; Belongs to the TmoA/XamoA family.
     
 0.860
MCA2618
Cytochrome c-555; Identified by similarity to SP:P04369; match to protein family HMM PF00034.
 
 
 0.831
MCA0789
MxaD protein; Identified by similarity to GP:773184.
 
     0.800
MCA0300
MxaJ protein; Identified by similarity to GP:1657793.
 
  
 0.797
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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