Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MCA0780MxaJ protein; Identified by similarity to GP:7258335. (190 aa)    
Predicted Functional Partners:
MCA0781
Cytochrome c family protein; Identified by similarity to SP:P14774; match to protein family HMM PF00034.
 
   
 0.958
mxaF
Methanol dehydrogenase protein, large subunit; Identified by similarity to SP:P16027; match to protein family HMM PF01011.
 
  
 0.950
mxaI
Methanol dehydrogenase, small subunit; Catalyzes the oxidation of primary alcohols including methanol.
 
     0.924
MCA0784
Conserved hypothetical protein; Identified by similarity to GP:19917169.
 
     0.853
MCA0785
MxaA protein; Identified by similarity to GP:773180.
 
     0.833
MCA0786
MxaC protein; Identified by similarity to GP:1164996.
 
     0.833
MCA2778
Formaldehyde-activating enzyme domain protein; Identified by similarity to GP:11193064.
  
  
  0.831
MCA0788
MxaL protein; Identified by similarity to GP:773183.
 
     0.823
MCA0787
MxaK protein; Identified by similarity to GP:2828246.
 
     0.820
MCA0789
MxaD protein; Identified by similarity to GP:773184.
 
     0.819
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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