STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MCA0791Putative transporter; Identified by similarity to OMNI:AF2308. (413 aa)    
Predicted Functional Partners:
MCA0196
Conserved hypothetical protein; Identified by similarity to GP:18893692; match to protein family HMM PF01951.
  
   
 0.699
MCA0197
Conserved hypothetical protein; Identified by similarity to OMNI:NTL02SS0707; match to protein family HMM PF01864.
  
   
 0.694
MCA1346
Sodium/bile acid symporter family protein; Identified by match to protein family HMM PF01758.
      
 0.632
hisA
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; Identified by match to protein family HMM PF00977; match to protein family HMM TIGR00007.
   
  
 0.624
MCA2319
Putative formylmethanofurane dehydrogenase, subunit; Identified by similarity to GP:13559971; match to protein family HMM PF07969.
      
 0.618
MCA2732
Conserved hypothetical protein; Identified by similarity to GP:19915032.
      
 0.618
MCA2834
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01MT00914.
      
 0.618
MCA2857
Putative formylmethanofurane dehydrogenase subunit; Identified by similarity to SP:Q59579; match to protein family HMM PF01493.
      
 0.618
MCA2860
Formylmethanofuran dehydrogenase; Identified by similarity to GP:1881465.
      
 0.618
MCA2867
Identified by similarity to GP:11193065; match to protein family HMM PF00977; Belongs to the HisA/HisF family.
      
 0.618
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.