Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MCA0853 | MCA0855 | MCA0853 | MCA0855 | Putative ATP-dependent protease; Identified by match to protein family HMM PF05362. | ErfK/YbiS/YcfS/YnhG family protein; Identified by similarity to OMNI:NTL03PA02854; match to protein family HMM PF01476; match to protein family HMM PF03734. | 0.499 |
| MCA0853 | rdgC | MCA0853 | MCA0854 | Putative ATP-dependent protease; Identified by match to protein family HMM PF05362. | Recombination-associated protein RdgC; May be involved in recombination; Belongs to the RdgC family. | 0.568 |
| MCA0855 | MCA0853 | MCA0855 | MCA0853 | ErfK/YbiS/YcfS/YnhG family protein; Identified by similarity to OMNI:NTL03PA02854; match to protein family HMM PF01476; match to protein family HMM PF03734. | Putative ATP-dependent protease; Identified by match to protein family HMM PF05362. | 0.499 |
| MCA0855 | rdgC | MCA0855 | MCA0854 | ErfK/YbiS/YcfS/YnhG family protein; Identified by similarity to OMNI:NTL03PA02854; match to protein family HMM PF01476; match to protein family HMM PF03734. | Recombination-associated protein RdgC; May be involved in recombination; Belongs to the RdgC family. | 0.715 |
| rdgC | MCA0853 | MCA0854 | MCA0853 | Recombination-associated protein RdgC; May be involved in recombination; Belongs to the RdgC family. | Putative ATP-dependent protease; Identified by match to protein family HMM PF05362. | 0.568 |
| rdgC | MCA0855 | MCA0854 | MCA0855 | Recombination-associated protein RdgC; May be involved in recombination; Belongs to the RdgC family. | ErfK/YbiS/YcfS/YnhG family protein; Identified by similarity to OMNI:NTL03PA02854; match to protein family HMM PF01476; match to protein family HMM PF03734. | 0.715 |
| rdgC | rpoA | MCA0854 | MCA2347 | Recombination-associated protein RdgC; May be involved in recombination; Belongs to the RdgC family. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.516 |
| rdgC | rpoB | MCA0854 | MCA1066 | Recombination-associated protein RdgC; May be involved in recombination; Belongs to the RdgC family. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.438 |
| rdgC | smpA | MCA0854 | MCA2622 | Recombination-associated protein RdgC; May be involved in recombination; Belongs to the RdgC family. | Small protein A; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.444 |
| rpoA | rdgC | MCA2347 | MCA0854 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Recombination-associated protein RdgC; May be involved in recombination; Belongs to the RdgC family. | 0.516 |
| rpoA | rpoB | MCA2347 | MCA1066 | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.995 |
| rpoB | rdgC | MCA1066 | MCA0854 | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Recombination-associated protein RdgC; May be involved in recombination; Belongs to the RdgC family. | 0.438 |
| rpoB | rpoA | MCA1066 | MCA2347 | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.995 |
| smpA | rdgC | MCA2622 | MCA0854 | Small protein A; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Recombination-associated protein RdgC; May be involved in recombination; Belongs to the RdgC family. | 0.444 |