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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA0866Putative oxygen-independent coproporphyrinogen III oxidase family protein; Identified by similarity to GP:18145308; match to protein family HMM PF04055. (504 aa)    
Predicted Functional Partners:
MCA3113
Conserved hypothetical protein; Identified by similarity to OMNI:NTL03PA03455; match to protein family HMM PF03976.
   
    0.609
MCA3023
Ham1 protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
      0.584
MCA0867
Smr domain protein; Identified by match to protein family HMM PF01713.
  
    0.578
MCA0868
Conserved hypothetical protein; Identified by similarity to GP:17131131.
       0.578
MCA0865
Conserved hypothetical protein; Identified by similarity to OMNI:NTL03PA04030; match to protein family HMM PF06167; Belongs to the MtfA family.
       0.557
MCA0864
Conserved hypothetical protein; Identified by similarity to OMNI:VC2536; match to protein family HMM PF04751; Belongs to the UPF0307 family.
       0.407
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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