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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA0921Conserved domain protein; Identified by similarity to GP:6959523. (241 aa)    
Predicted Functional Partners:
MCA0919
Putative membrane protein; Identified by similarity to GP:17427439.
 
     0.947
MCA0918
Putative lipoprotein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.943
MCA0920
Identified by match to protein family HMM PF01522.
 
     0.943
MCA0917
Conserved hypothetical protein.
 
     0.910
MCA0926
Putative (3R)-hydroxymyristoyl-acyl-carrier-protein dehydratase; Identified by similarity to SP:P21773.
 
     0.789
MCA1494
Putative oxidoreductase, FAD-binding; Identified by match to protein family HMM PF01494.
 
     0.778
MCA0915
Putative membrane protein; Identified by similarity to GP:19483795.
 
     0.775
MCA0925
Beta-ketoacyl synthase domain protein; Identified by similarity to GP:17427436.
 
     0.761
MCA1496
Putative acyltransferase; Identified by match to protein family HMM PF01553.
 
     0.740
MCA0914
Putative acyl carrier protein; Identified by similarity to SP:P20804.
 
     0.730
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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