Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MCA0942Putative oligo-1,6-glucosidase; Identified by similarity to PIR:JE0181; match to protein family HMM PF00128. (539 aa)    
Predicted Functional Partners:
bgl
Beta-glucosidase; Identified by similarity to SP:Q08638; match to protein family HMM PF00232.
 
 
 0.947
malQ
4-alpha-glucanotransferase; Identified by similarity to SP:P29851; match to protein family HMM PF02446; match to protein family HMM TIGR00217.
  
 
 0.941
MCA0661
ROK family protein; Identified by similarity to SP:P75959; match to protein family HMM PF00480.
    
 0.913
MCA2118
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SS00882; match to protein family HMM PF03065.
    
 0.905
MCA0941
Putative glycosyl hydrolase; Identified by match to protein family HMM PF01301; Belongs to the glycosyl hydrolase 35 family.
 
   
 0.830
MCA0943
Hypothetical protein; Identified by Glimmer2; putative.
       0.773
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
  
 0.633
MCA0944
Conserved domain protein.
       0.572
gltB
Glutamate synthase, large subunit; Identified by similarity to SP:P39812; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04897; match to protein family HMM PF04898.
     
 0.553
glgX
Glycogen debranching enzyme GlgX; Identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02100; Belongs to the glycosyl hydrolase 13 family.
 
  
0.519
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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