STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA0960Glyoxalase family protein; Identified by similarity to OMNI:NTL01BH3878; match to protein family HMM PF00903. (108 aa)    
Predicted Functional Partners:
MCA0959
HAD-superfamily hydrolase, subfamily IA, variant 3 family protein; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509.
       0.773
MCA0659
Conserved hypothetical protein; Identified by similarity to GP:17135534; match to protein family HMM PF05899.
  
     0.640
MCA0957
MgtC family protein; Identified by similarity to SP:P22037; match to protein family HMM PF02308.
       0.598
MCA0958
Hypothetical protein; Identified by Glimmer2; putative.
       0.598
MCA0961
Aminopeptidase I,M18 family; Identified by similarity to SP:Q9HYZ3; match to protein family HMM PF02127.
       0.561
MCA2718
Conserved hypothetical protein; Identified by similarity to GP:1785478.
  
     0.478
MCA0955
Hypothetical protein; Identified by Glimmer2; putative.
       0.471
MCA0956
Hydroxylamine oxydoreductase; Identified by similarity to SP:Q50925.
       0.471
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.