close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA0994Conserved hypothetical protein; Identified by similarity to GP:17428164. (326 aa)    
Predicted Functional Partners:
MCA0338
Cytochrome c5530 family protein; Identified by similarity to GP:4325062.
  
     0.674
MCA2199
Ankyrin repeat domain protein; Identified by match to protein family HMM PF00023.
 
 
 0.612
MCA2285
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.598
MCA0685
Conserved domain protein; Identified by similarity to GP:3462874; match to protein family HMM PF03734.
  
     0.562
MCA2410
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.538
MCA2198
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.505
MCA3099
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
  
   
 0.493
MCA1827
Conserved hypothetical protein; Identified by similarity to GP:12698380.
  
     0.484
MCA2117
Rhodanese-like domain/ankyrin repeat domain protein; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.
   
 
 0.477
MCA2187
Identified by match to protein family HMM PF00245; Belongs to the alkaline phosphatase family.
 
   
 0.470
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.