STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA1016Putative dioxygenase, iron-sulfur subunit; Identified by similarity to SP:O05616; match to protein family HMM PF00355. (369 aa)    
Predicted Functional Partners:
MCA1017
Nucleoside diphosphate sugar epimerase family protein; Identified by match to protein family HMM PF07993.
 
   
 0.870
cyp51
Cytochrome P450 51; Identified by similarity to SP:P77901; match to protein family HMM PF00067.
 
  
 0.763
MCA1013
Putative membrane protein; Identified by similarity to GP:17427439.
 
     0.669
MCA1014
Hypothetical protein; Identified by Glimmer2; putative.
       0.661
MCA1015
Conserved domain protein.
       0.661
mmoC
Methane monooxygenase, C subunit; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds. The component C is the iron-sulfur flavoprotein of sMMO.
  
  
 0.539
MCA2508
Putative oxygenase; Identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970.
  
  
 0.539
MCA2872
Identified by match to protein family HMM PF01360.
  
  
 0.511
MCA1018
ErfK/YbiS/YcfS/YnhG family protein; Identified by similarity to OMNI:NTL02SC5233; match to protein family HMM PF03734.
  
     0.504
MCA1238
Polyketide synthase; Identified by similarity to GP:24575128; match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01590; match to protein family HMM PF02801.
     
 0.499
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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