MCA1032 protein (Methylococcus capsulatus) - STRING interaction network

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MCA1032

S1 RNA binding domain protein; Identified by similarity to SP:P46837; match to protein family HMM PF00575. (735 aa)

Predicted Functional Partners:

rpoA

0.835

rpoB

0.826

rpoZ

0.803

hepA

0.607

MCA0036

0.400

MCA2682

0.400

Your Current Organism:

Methylococcus capsulatus

NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MCA0036	MCA1032	MCA0036	MCA1032	Hypothetical protein; Identified by Glimmer2; putative.	S1 RNA binding domain protein; Identified by similarity to SP:P46837; match to protein family HMM PF00575.	0.400
MCA0036	MCA2682	MCA0036	MCA2682	Hypothetical protein; Identified by Glimmer2; putative.	Prophage LambdaMc01, helicase, SNF2 family; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04851.	0.427
MCA0036	rpoA	MCA0036	MCA2347	Hypothetical protein; Identified by Glimmer2; putative.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.898
MCA0036	rpoB	MCA0036	MCA1066	Hypothetical protein; Identified by Glimmer2; putative.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.896
MCA0036	rpoZ	MCA0036	MCA2022	Hypothetical protein; Identified by Glimmer2; putative.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.900
MCA1032	MCA0036	MCA1032	MCA0036	S1 RNA binding domain protein; Identified by similarity to SP:P46837; match to protein family HMM PF00575.	Hypothetical protein; Identified by Glimmer2; putative.	0.400
MCA1032	MCA2682	MCA1032	MCA2682	S1 RNA binding domain protein; Identified by similarity to SP:P46837; match to protein family HMM PF00575.	Prophage LambdaMc01, helicase, SNF2 family; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04851.	0.400
MCA1032	hepA	MCA1032	MCA2531	S1 RNA binding domain protein; Identified by similarity to SP:P46837; match to protein family HMM PF00575.	RNA polymerase-associated protein HepA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.	0.607
MCA1032	rpoA	MCA1032	MCA2347	S1 RNA binding domain protein; Identified by similarity to SP:P46837; match to protein family HMM PF00575.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.835
MCA1032	rpoB	MCA1032	MCA1066	S1 RNA binding domain protein; Identified by similarity to SP:P46837; match to protein family HMM PF00575.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.826
MCA1032	rpoZ	MCA1032	MCA2022	S1 RNA binding domain protein; Identified by similarity to SP:P46837; match to protein family HMM PF00575.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.803
MCA2682	MCA0036	MCA2682	MCA0036	Prophage LambdaMc01, helicase, SNF2 family; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04851.	Hypothetical protein; Identified by Glimmer2; putative.	0.427
MCA2682	MCA1032	MCA2682	MCA1032	Prophage LambdaMc01, helicase, SNF2 family; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04851.	S1 RNA binding domain protein; Identified by similarity to SP:P46837; match to protein family HMM PF00575.	0.400
MCA2682	hepA	MCA2682	MCA2531	Prophage LambdaMc01, helicase, SNF2 family; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04851.	RNA polymerase-associated protein HepA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.	0.527
MCA2682	rpoA	MCA2682	MCA2347	Prophage LambdaMc01, helicase, SNF2 family; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04851.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.898
MCA2682	rpoB	MCA2682	MCA1066	Prophage LambdaMc01, helicase, SNF2 family; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04851.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.896
MCA2682	rpoZ	MCA2682	MCA2022	Prophage LambdaMc01, helicase, SNF2 family; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04851.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.900
hepA	MCA1032	MCA2531	MCA1032	RNA polymerase-associated protein HepA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.	S1 RNA binding domain protein; Identified by similarity to SP:P46837; match to protein family HMM PF00575.	0.607
hepA	MCA2682	MCA2531	MCA2682	RNA polymerase-associated protein HepA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.	Prophage LambdaMc01, helicase, SNF2 family; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04851.	0.527
hepA	rpoA	MCA2531	MCA2347	RNA polymerase-associated protein HepA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.966

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