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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA1070Conserved hypothetical protein; Identified by similarity to OMNI:NTL03PA01768. (510 aa)    
Predicted Functional Partners:
MCA1071
Conserved hypothetical protein; Identified by similarity to OMNI:NTL03PA01767; match to protein family HMM TIGR02291.
  
 0.977
MCA1069
Conserved hypothetical protein; Identified by similarity to OMNI:NTL03PA00458; match to protein family HMM PF05618.
 
    0.935
MCA0185
Putative lipoprotein; Identified by similarity to OMNI:NTL03PA04424; match to protein family HMM PF04348.
  
    0.509
MCA1068
Cytochrome c family protein; Identified by similarity to SP:Q52369; match to protein family HMM PF00034.
       0.443
MCA0710
Putative lipoprotein; Identified by similarity to OMNI:NTL03PA02230.
  
     0.418
MCA2098
Putative DNA polymerase III, chi subunit; Identified by similarity to SP:P28905; match to protein family HMM PF04364.
  
     0.404
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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