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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA1142Hydrogenase subunit; Identified by match to protein family HMM PF00361. (748 aa)    
Predicted Functional Partners:
MCA1138
Hydrogenase subunit; Identified by similarity to SP:P77329; match to protein family HMM PF00329; match to protein family HMM PF00346.
 
 
 0.998
MCA1141
Hydrogenase subunit; Identified by similarity to GP:12744950; match to protein family HMM PF00146.
 
 
 0.992
MCA1137
Hydrogenase subunit; Identified by similarity to GP:19918502; match to protein family HMM PF01058.
 
 
 0.989
MCA1139
Hydrogenase subunit; Identified by similarity to SP:P77437; match to protein family HMM PF00361.
 
  
0.973
MCA1140
Hydrogenase subunit; Identified by similarity to SP:P77524.
 
  
 0.969
MCA0513
Putative NADH ubiquinone/plastoquinone complex subunit; Identified by similarity to GP:17221967; match to protein family HMM PF00361; match to protein family HMM PF00662.
 
0.923
nuoL
NADH dehydrogenase I, L subunit; Identified by similarity to SP:P33607; match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974.
 
 
0.921
nuoCD
NADH dehydrogenase I, C/D subunits; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
  
 
 0.874
MCA1143
Conserved hypothetical protein; Identified by similarity to GP:17132082; match to protein family HMM PF05685.
       0.543
MCA1144
Hypothetical protein; Identified by Glimmer2; putative.
       0.543
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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