Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MCA1160Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534. (383 aa)    
Predicted Functional Partners:
MCA1158
Glycosyl transferase, group 2 family; Identified by match to protein family HMM PF00535.
 
  
 0.822
MCA1159
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
    
0.815
MCA1153
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
     0.737
MCA1157
Methyltransferase, FkbM family; Identified by match to protein family HMM TIGR01444.
       0.722
MCA1156
Putative membrane protein.
  
    0.708
MCA1166
Identified by similarity to GP:17132272; match to protein family HMM PF00535.
  
 0.686
MCA1155
Methyltransferase, FkbM family; Identified by match to protein family HMM TIGR01444.
 
     0.678
MCA1168
Putative colanic acid biosynthesis glycosyl transferase; Identified by similarity to SP:P32057; match to protein family HMM PF00534.
 
    0.649
MCA1152
Conserved domain protein; Identified by similarity to GP:14028308; match to protein family HMM TIGR01444.
 
     0.578
MCA0474
ATP-dependent DNA helicase, UvrD/REP family; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00580; match to protein family HMM TIGR00614.
    
   0.565
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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