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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA1163Putative nodulation protein nolNO; Identified by similarity to SP:P55474; match to protein family HMM PF02543. (584 aa)    
Predicted Functional Partners:
MCA1164
Methyltransferase domain protein.
       0.757
MCA1161
Hypothetical protein; Identified by Glimmer2; putative.
       0.614
MCA1162
Putative alginate O-acetyltransferase; Identified by similarity to GP:1245347; match to protein family HMM PF03062; Belongs to the membrane-bound acyltransferase family.
       0.608
MCA1166
Identified by similarity to GP:17132272; match to protein family HMM PF00535.
 
     0.540
MCA1165
Identified by match to protein family HMM PF01370; match to protein family HMM PF07993.
     
 0.441
MCA1883
Non-ribosomal peptide synthetase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF00668; match to protein family HMM PF00975; match to protein family HMM TIGR01733; Belongs to the ATP-dependent AMP-binding enzyme family.
 
   
 0.441
MCA1159
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
     0.435
MCA1152
Conserved domain protein; Identified by similarity to GP:14028308; match to protein family HMM TIGR01444.
 
     0.418
MCA1160
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
     0.412
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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