Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MCA1174Conserved hypothetical protein; Identified by similarity to OMNI:VC0935. (477 aa)    
Predicted Functional Partners:
MCA1173
Putative membrane protein; Identified by similarity to OMNI:VC0931; match to protein family HMM PF04932.
 
     0.903
MCA1175
Polysaccharide biosynthesis/export protein; Identified by match to protein family HMM PF02563.
 
     0.871
MCA1176
Putative exopolysaccharide export protein, interruption-N; This gene is interrupted by an IS element; identified by similarity to OMNI:NTL01SS00315; match to protein family HMM PF02706.
 
     0.857
MCA1178
Putative exopolysaccharide export protein, interruption-C; This gene is interrupted by an IS element; identified by similarity to SP:Q45409.
 
   
 0.815
MCA1179
Putative capsular polysaccharide biosynthesis protein; Identified by similarity to GP:12006001.
 
     0.763
MCA0149
Chain length determinant protein; Identified by match to protein family HMM PF02706.
 
     0.666
MCA0147
Putative polysaccharide biosythesis protein; Identified by similarity to GP:4972659; match to protein family HMM PF02397.
 
     0.625
MCA1429
Chain length determinant protein; Identified by match to protein family HMM PF02706.
 
   
 0.589
MCA0150
Conserved domain protein.
 
     0.547
MCA0061
General secretion pathway protein A; Identified by similarity to SP:P45754; match to protein family HMM PF01471.
 
     0.479
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.