Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MCA1257resA domain protein; Identified by similarity to SP:P35160. (165 aa)    
Predicted Functional Partners:
MCA1258
Conserved hypothetical protein TIGR00701; Identified by match to protein family HMM PF03653; match to protein family HMM TIGR00701.
  
    0.818
MCA1042
Thiol:disulfide interchange protein like protein.
 
   
 0.773
MCA1259
Conserved hypothetical protein; Identified by similarity to GP:8246798.
       0.737
MCA1256
Conserved hypothetical protein; Identified by similarity to GP:17427469; match to protein family HMM PF04280.
       0.655
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
   
   0.559
MCA1260
Transcriptional regulator, LuxR family; Identified by match to protein family HMM PF00196.
       0.552
dsbE-1
Thiol:disulfide interchange protein DsbE; Identified by similarity to SP:P33926; match to protein family HMM TIGR00385.
 
   
 0.427
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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