close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA1290Hypothetical protein; Identified by Glimmer2; putative. (158 aa)    
Predicted Functional Partners:
mmoY
Methane monooxygenase, A subunit, beta chain; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds.
  
     0.723
mmoX
Methane monooxygenase, A subunit, alpha chain; Responsible for the initial oxygenation of methane to methanol in methanotrophs. It also catalyzes the monohydroxylation of a variety of unactivated alkenes, alicyclic, aromatic and heterocyclic compounds; Belongs to the TmoA/XamoA family.
  
     0.705
MCA1432
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
  
     0.595
MCA1291
Conserved hypothetical protein; Identified by similarity to OMNI:NTL01SS03128.
       0.578
MCA2751
TonB domain protein; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
  
     0.506
MCA2180
Putative TonB-dependent receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.
  
     0.483
MCA1289
Hypothetical protein; Identified by Glimmer2; putative.
       0.461
MCA1428
Glycosyl transferase, group 1 family protein; Identified by similarity to OMNI:CC0755; match to protein family HMM PF00534.
  
     0.456
MCA1288
N-acetylmuramoyl-L-alanine amidase domain/peptidoglycan binding domain protein; Identified by match to protein family HMM PF01471; match to protein family HMM PF01510.
       0.455
MCA1292
Hypothetical protein; Identified by Glimmer2; putative.
       0.447
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.