STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA1428Glycosyl transferase, group 1 family protein; Identified by similarity to OMNI:CC0755; match to protein family HMM PF00534. (352 aa)    
Predicted Functional Partners:
MCA1429
Chain length determinant protein; Identified by match to protein family HMM PF02706.
 
  
 0.933
MCA1426
Transferase; Identified by similarity to SP:P08632.
 
    0.916
MCA1427
Glycosyl transferase, group 2 family protein; Identified by similarity to GP:18159365; match to protein family HMM PF00535.
 
     0.900
MCA1430
Putative capsular polysaccharide export protein; Identified by similarity to SP:Q45407; match to protein family HMM PF02563.
 
    0.889
MCA1432
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
     0.851
MCA1433
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
     0.821
MCA1439
Conserved domain protein; Identified by similarity to OMNI:NTL01MT01553.
 
   0.806
MCA1425
Putative membrane protein; Identified by similarity to GP:17427522.
       0.773
MCA1437
Bacterial sugar transferase/glycosyl transferase, WecB/TagA/CpsF family protein; Identified by match to protein family HMM PF03808; match to protein family HMM TIGR00696; Belongs to the glycosyltransferase 26 family.
 
 
 0.757
MCA1434
Identified by similarity to GP:15024655; match to protein family HMM PF00535.
 
     0.653
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.