close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCA1430Putative capsular polysaccharide export protein; Identified by similarity to SP:Q45407; match to protein family HMM PF02563. (333 aa)    
Predicted Functional Partners:
MCA1429
Chain length determinant protein; Identified by match to protein family HMM PF02706.
 
 
 0.993
MCA1427
Glycosyl transferase, group 2 family protein; Identified by similarity to GP:18159365; match to protein family HMM PF00535.
   
 0.977
MCA1178
Putative exopolysaccharide export protein, interruption-C; This gene is interrupted by an IS element; identified by similarity to SP:Q45409.
 
 
 0.961
MCA0147
Putative polysaccharide biosythesis protein; Identified by similarity to GP:4972659; match to protein family HMM PF02397.
 
  
 0.944
MCA0148
Putative capsular polysaccharide export protein; Identified by similarity to SP:Q46629; match to protein family HMM PF02563.
  
  
 
0.926
MCA1428
Glycosyl transferase, group 1 family protein; Identified by similarity to OMNI:CC0755; match to protein family HMM PF00534.
 
    0.889
MCA1426
Transferase; Identified by similarity to SP:P08632.
 
    0.877
MCA0149
Chain length determinant protein; Identified by match to protein family HMM PF02706.
 
 
 0.862
MCA1432
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
    0.804
MCA1433
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
 
    0.777
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
Server load: medium (54%) [HD]