Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MCA1438Putative membrane protein; Identified by similarity to GP:15023201. (393 aa)    
Predicted Functional Partners:
MCA2192
Identified by match to protein family HMM PF02366.
     0.971
MCA1439
Conserved domain protein; Identified by similarity to OMNI:NTL01MT01553.
       0.773
MCA1440
Response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228.
       0.773
MCA1434
Identified by similarity to GP:15024655; match to protein family HMM PF00535.
  
    0.610
MCA1435
Glycosyl transferase, group 2 family; Identified by match to protein family HMM PF00535.
       0.608
MCA1436
Putative serine acetyltransferase CysE; Identified by similarity to SP:P71405; match to protein family HMM PF00132.
       0.608
MCA1437
Bacterial sugar transferase/glycosyl transferase, WecB/TagA/CpsF family protein; Identified by match to protein family HMM PF03808; match to protein family HMM TIGR00696; Belongs to the glycosyltransferase 26 family.
       0.608
MCA1432
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
       0.567
MCA1433
Glycosyl transferase, group 1 family protein; Identified by match to protein family HMM PF00534.
       0.567
MCA0827
HD domain protein; Identified by similarity to GP:15980550; match to protein family HMM PF01966.
  
     0.449
Your Current Organism:
Methylococcus capsulatus
NCBI taxonomy Id: 243233
Other names: M. capsulatus str. Bath, Methylococcus capsulatus ATCC 33009, Methylococcus capsulatus Bath, Methylococcus capsulatus MC, Methylococcus capsulatus NCIB 11132, Methylococcus capsulatus str. Bath
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.